Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm12393-201ENSMUST00000117084 848 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm4596-201ENSMUST00000117197 442 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm22555-201ENSMUST00000157801 62 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm16557-201ENSMUST00000159182 191 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm6650-201ENSMUST00000166710 614 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm27512-201ENSMUST00000175328 126 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Mir3097-201ENSMUST00000175356 67 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm26738-201ENSMUST00000181312 601 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm27004-201ENSMUST00000183300 727 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm29736-201ENSMUST00000198189 385 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm19195-201ENSMUST00000222018 511 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 AC155305.1-201ENSMUST00000222207 319 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 CT571256.1-201ENSMUST00000226045 585 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 AC137902.2-201ENSMUST00000227989 576 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm25810-201ENSMUST00000082752 108 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm15779-201ENSMUST00000117470 412 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm6744-201ENSMUST00000119303 543 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm16074-201ENSMUST00000119524 444 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm13998-201ENSMUST00000120952 335 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm5401-201ENSMUST00000122444 365 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm16139-201ENSMUST00000160015 420 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm6113-201ENSMUST00000180319 639 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm7952-201ENSMUST00000180540 984 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm26933-201ENSMUST00000182320 827 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm28927-201ENSMUST00000191528 272 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms