Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 AC154532.2-201ENSMUST00000228947 598 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr197-201ENSMUST00000080031 926 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Mir331-201ENSMUST00000083673 96 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Col8a1Q00780 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Mir92b-201ENSMUST00000102300 83 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm22952-201ENSMUST00000116720 120 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Mir467g-201ENSMUST00000116906 120 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm11859-201ENSMUST00000118099 455 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm12447-201ENSMUST00000119110 470 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm13245-201ENSMUST00000119646 260 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm16362-201ENSMUST00000135189 214 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm2892-201ENSMUST00000145537 711 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Mir3062-201ENSMUST00000174986 105 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm9529-201ENSMUST00000177598 579 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm26335-201ENSMUST00000178449 107 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm5947-201ENSMUST00000179156 714 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm5645-201ENSMUST00000179597 714 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm26923-201ENSMUST00000182615 996 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm37380-201ENSMUST00000193752 397 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm18702-201ENSMUST00000196923 588 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm5034-201ENSMUST00000199115 634 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm43973-201ENSMUST00000203562 210 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm17918-201ENSMUST00000205315 574 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm44972-201ENSMUST00000206419 406 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm18774-201ENSMUST00000218269 601 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm23516-201ENSMUST00000093728 107 ntBASIC5.43□□□□□ -1.54
Col8a1Q00780 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms