Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm9239-201ENSMUST00000186942 2557 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm3931-201ENSMUST00000119038 455 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Gm24689-201ENSMUST00000157760 104 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.44□□□□□ -1.86
PrkdcP97313 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC3.44□□□□□ -1.86
PrkdcP97313 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm25260-201ENSMUST00000083053 134 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PrkdcP97313 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm38026-201ENSMUST00000193284 3880 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm38125-201ENSMUST00000194136 3438 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm37283-201ENSMUST00000193111 1571 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Gm5660-201ENSMUST00000197453 1149 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm23686-201ENSMUST00000083241 164 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm42535-201ENSMUST00000197312 1399 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PrkdcP97313 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm14687-201ENSMUST00000120206 363 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PrkdcP97313 Gm29228-201ENSMUST00000185489 418 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Gm17956-201ENSMUST00000199931 838 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Gm44243-201ENSMUST00000204323 692 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Gm18507-201ENSMUST00000218855 525 ntBASIC3.44□□□□□ -1.86
PrkdcP97313 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PrkdcP97313 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
PrkdcP97313 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
PrkdcP97313 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PrkdcP97313 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm43395-201ENSMUST00000198717 2240 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Gm11486-201ENSMUST00000107322 478 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm14067-201ENSMUST00000119340 314 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.43□□□□□ -1.86
PrkdcP97313 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm27189-201ENSMUST00000184119 190 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Gm10292-202ENSMUST00000193165 585 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.43□□□□□ -1.86
PrkdcP97313 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PrkdcP97313 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PrkdcP97313 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm44242-201ENSMUST00000204212 2721 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
PrkdcP97313 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC3.43□□□□□ -1.86
PrkdcP97313 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm42819-201ENSMUST00000199630 5121 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm37967-201ENSMUST00000195634 2665 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Gm22497-201ENSMUST00000104499 131 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Gm15390-201ENSMUST00000120323 738 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Gm13593-201ENSMUST00000121329 692 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC3.43□□□□□ -1.86
PrkdcP97313 Mir6516-201ENSMUST00000196236 110 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm44871-201ENSMUST00000207821 497 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 AC138765.1-201ENSMUST00000228657 385 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 n-R5s168-201ENSMUST00000083948 104 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PrkdcP97313 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PrkdcP97313 Gm37541-201ENSMUST00000192464 2315 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 AC131586.2-202ENSMUST00000227016 2705 ntBASIC3.43□□□□□ -1.86
PrkdcP97313 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PrkdcP97313 Defa-ps15-201ENSMUST00000118178 477 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms