Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
HttP42859 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.24□□□□□ -1.57
HttP42859 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.24□□□□□ -1.57
HttP42859 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HttP42859 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Gm24376-201ENSMUST00000104399 127 ntBASIC5.24□□□□□ -1.57
HttP42859 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.24□□□□□ -1.57
HttP42859 Gm6802-202ENSMUST00000186566 126 ntBASIC5.24□□□□□ -1.57
HttP42859 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.24□□□□□ -1.57
HttP42859 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HttP42859 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HttP42859 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.24□□□□□ -1.57
HttP42859 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HttP42859 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Gm22059-201ENSMUST00000157544 104 ntBASIC5.24□□□□□ -1.57
HttP42859 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HttP42859 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.24□□□□□ -1.57
HttP42859 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.24□□□□□ -1.57
HttP42859 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HttP42859 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC5.24□□□□□ -1.57
HttP42859 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HttP42859 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.24□□□□□ -1.57
HttP42859 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HttP42859 Gm20045-201ENSMUST00000192658 5577 ntBASIC5.24□□□□□ -1.57
HttP42859 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HttP42859 Gm14303-201ENSMUST00000121320 171 ntBASIC5.23□□□□□ -1.57
HttP42859 Gm23354-201ENSMUST00000158426 104 ntBASIC5.23□□□□□ -1.57
HttP42859 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 AC134577.1-201ENSMUST00000227572 295 ntBASIC5.23□□□□□ -1.57
HttP42859 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.23□□□□□ -1.57
HttP42859 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HttP42859 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.23□□□□□ -1.57
HttP42859 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.23□□□□□ -1.57
HttP42859 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.23□□□□□ -1.57
HttP42859 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.23□□□□□ -1.57
HttP42859 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.23□□□□□ -1.57
HttP42859 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.23□□□□□ -1.57
HttP42859 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm12931-201ENSMUST00000117046 324 ntBASIC5.23□□□□□ -1.57
HttP42859 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.23□□□□□ -1.57
HttP42859 Gm15385-201ENSMUST00000118725 667 ntBASIC5.23□□□□□ -1.57
HttP42859 Gm16106-201ENSMUST00000119187 294 ntBASIC5.23□□□□□ -1.57
HttP42859 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Gm18183-201ENSMUST00000191024 615 ntBASIC5.23□□□□□ -1.57
HttP42859 Gm5885-202ENSMUST00000203357 528 ntBASIC5.23□□□□□ -1.57
HttP42859 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm44984-201ENSMUST00000207802 394 ntBASIC5.23□□□□□ -1.57
HttP42859 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.23□□□□□ -1.57
HttP42859 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.23□□□□□ -1.57
HttP42859 Gm32526-201ENSMUST00000221878 981 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms