Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm4602-201ENSMUST00000203198 308 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm25595-201ENSMUST00000102273 97 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm25919-201ENSMUST00000104271 132 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm8595-201ENSMUST00000118250 630 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm13488-201ENSMUST00000120419 179 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm14065-201ENSMUST00000120848 585 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Mir1963-201ENSMUST00000158594 59 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm17046-201ENSMUST00000168078 850 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Mir3080-201ENSMUST00000175010 79 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Mir3110-201ENSMUST00000175053 80 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm18348-201ENSMUST00000191227 820 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm37445-201ENSMUST00000195318 242 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm43655-201ENSMUST00000197367 222 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Mir409-201ENSMUST00000198153 79 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm18482-201ENSMUST00000202405 760 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 CT009754.4-201ENSMUST00000221430 565 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm24525-201ENSMUST00000082917 151 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Chmp6P0C0A3 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm14756-201ENSMUST00000116395 240 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm13077-201ENSMUST00000121941 484 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm25861-201ENSMUST00000158251 109 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm18953-201ENSMUST00000175694 300 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm27762-201ENSMUST00000183417 109 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm37882-201ENSMUST00000195254 196 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm44683-201ENSMUST00000209088 484 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.66□□□□□ -1.5
Chmp6P0C0A3 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.66□□□□□ -1.5
Chmp6P0C0A3 AV026068-237ENSMUST00000226075 572 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms