Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TnfP06804 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TnfP06804 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
TnfP06804 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.52□□□□□ -1.53
TnfP06804 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TnfP06804 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TnfP06804 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TnfP06804 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.51□□□□□ -1.53
TnfP06804 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.51□□□□□ -1.53
TnfP06804 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TnfP06804 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.51□□□□□ -1.53
TnfP06804 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 Gm2199-201ENSMUST00000119065 874 ntBASIC5.51□□□□□ -1.53
TnfP06804 Gm12281-201ENSMUST00000119536 298 ntBASIC5.51□□□□□ -1.53
TnfP06804 Gm14587-201ENSMUST00000121714 658 ntBASIC5.51□□□□□ -1.53
TnfP06804 Gm15171-201ENSMUST00000122191 334 ntBASIC5.51□□□□□ -1.53
TnfP06804 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.51□□□□□ -1.53
TnfP06804 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Gm16345-201ENSMUST00000146065 158 ntBASIC5.51□□□□□ -1.53
TnfP06804 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.51□□□□□ -1.53
TnfP06804 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.51□□□□□ -1.53
TnfP06804 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.51□□□□□ -1.53
TnfP06804 Gm28976-201ENSMUST00000188070 144 ntBASIC5.51□□□□□ -1.53
TnfP06804 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.51□□□□□ -1.53
TnfP06804 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TnfP06804 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.51□□□□□ -1.53
TnfP06804 Gm19189-201ENSMUST00000221689 754 ntBASIC5.51□□□□□ -1.53
TnfP06804 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.51□□□□□ -1.53
TnfP06804 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.51□□□□□ -1.53
TnfP06804 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.51□□□□□ -1.53
TnfP06804 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
TnfP06804 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TnfP06804 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.51□□□□□ -1.53
TnfP06804 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.51□□□□□ -1.53
TnfP06804 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TnfP06804 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.5□□□□□ -1.53
TnfP06804 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
TnfP06804 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.5□□□□□ -1.53
TnfP06804 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.5□□□□□ -1.53
TnfP06804 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
TnfP06804 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TnfP06804 AW046200-203ENSMUST00000211787 2479 ntBASIC5.5□□□□□ -1.53
TnfP06804 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TnfP06804 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.5□□□□□ -1.53
TnfP06804 Gm15388-201ENSMUST00000121578 726 ntBASIC5.5□□□□□ -1.53
TnfP06804 Gm25179-201ENSMUST00000122632 128 ntBASIC5.5□□□□□ -1.53
TnfP06804 Gm16254-201ENSMUST00000131528 730 ntBASIC5.5□□□□□ -1.53
TnfP06804 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.5□□□□□ -1.53
TnfP06804 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.5□□□□□ -1.53
TnfP06804 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Gm9134-201ENSMUST00000193186 551 ntBASIC5.5□□□□□ -1.53
TnfP06804 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.5□□□□□ -1.53
TnfP06804 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.5□□□□□ -1.53
TnfP06804 Gm17775-201ENSMUST00000198542 258 ntBASIC5.5□□□□□ -1.53
TnfP06804 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.5□□□□□ -1.53
TnfP06804 Gm43631-201ENSMUST00000202011 369 ntBASIC5.5□□□□□ -1.53
TnfP06804 Gm32453-201ENSMUST00000204183 456 ntBASIC5.5□□□□□ -1.53
TnfP06804 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.5□□□□□ -1.53
TnfP06804 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.5□□□□□ -1.53
TnfP06804 Gm11360-201ENSMUST00000221898 262 ntBASIC5.5□□□□□ -1.53
TnfP06804 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.5□□□□□ -1.53
TnfP06804 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TnfP06804 Gm25260-201ENSMUST00000083053 134 ntBASIC5.5□□□□□ -1.53
TnfP06804 Mir342-201ENSMUST00000083502 99 ntBASIC5.5□□□□□ -1.53
TnfP06804 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.5□□□□□ -1.53
TnfP06804 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.5□□□□□ -1.53
TnfP06804 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TnfP06804 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.5□□□□□ -1.53
TnfP06804 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TnfP06804 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TnfP06804 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TnfP06804 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TnfP06804 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TnfP06804 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms