Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.51□□□□□ -1.53
Cldn5O54942 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm17091-201ENSMUST00000163248 357 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm8480-201ENSMUST00000190350 698 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC5.51□□□□□ -1.53
Cldn5O54942 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm45660-201ENSMUST00000210267 151 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cldn5O54942 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.51□□□□□ -1.53
Cldn5O54942 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cldn5O54942 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm24706-201ENSMUST00000082806 137 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cldn5O54942 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.51□□□□□ -1.53
Cldn5O54942 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Cldn5O54942 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cldn5O54942 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cldn5O54942 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.51□□□□□ -1.53
Cldn5O54942 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cldn5O54942 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Cldn5O54942 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm23593-201ENSMUST00000104309 120 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm12422-201ENSMUST00000121431 302 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 Gm13077-201ENSMUST00000121941 484 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.5□□□□□ -1.53
Cldn5O54942 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm26350-201ENSMUST00000157531 288 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm27543-201ENSMUST00000183562 177 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm17981-201ENSMUST00000191109 739 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 Gm37503-201ENSMUST00000192088 319 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
Cldn5O54942 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm20946-201ENSMUST00000212367 461 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.5□□□□□ -1.53
Cldn5O54942 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.5□□□□□ -1.53
Cldn5O54942 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Cldn5O54942 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cldn5O54942 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Cldn5O54942 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cldn5O54942 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.5□□□□□ -1.53
Cldn5O54942 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Cldn5O54942 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cldn5O54942 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Gm16420-201ENSMUST00000120258 856 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Gm25348-201ENSMUST00000158961 111 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Gm21999-201ENSMUST00000165985 387 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.49□□□□□ -1.53
Cldn5O54942 Gm43724-201ENSMUST00000197516 226 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Gm18924-201ENSMUST00000211929 316 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Gm8137-201ENSMUST00000218997 463 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cldn5O54942 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Cldn5O54942 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cldn5O54942 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.49□□□□□ -1.53
Cldn5O54942 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms