Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Hmgb3O54879 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Hmgb3O54879 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm11486-201ENSMUST00000107322 478 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm13578-201ENSMUST00000120849 590 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm12332-201ENSMUST00000121397 922 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm8761-201ENSMUST00000121507 955 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm26410-201ENSMUST00000157670 261 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm23280-201ENSMUST00000157905 139 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm24944-201ENSMUST00000158330 128 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm25907-201ENSMUST00000158486 125 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm24682-201ENSMUST00000158764 137 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm23774-201ENSMUST00000158990 131 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm16566-201ENSMUST00000160387 910 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm20561-201ENSMUST00000188131 292 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm37932-201ENSMUST00000192258 1167 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm18717-201ENSMUST00000192744 1241 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 AC157822.1-201ENSMUST00000196643 80 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm42990-201ENSMUST00000199231 312 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm43036-201ENSMUST00000200594 373 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.14□□□□□ -1.75
Hmgb3O54879 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm45259-201ENSMUST00000209217 1006 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm18541-201ENSMUST00000215935 538 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.14□□□□□ -1.75
Hmgb3O54879 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Hmgb3O54879 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm37289-201ENSMUST00000195409 1402 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm8424-201ENSMUST00000117716 988 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm14531-201ENSMUST00000120845 285 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm25430-201ENSMUST00000157614 289 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm22361-201ENSMUST00000158435 176 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm26404-201ENSMUST00000158498 109 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm20530-201ENSMUST00000174261 254 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Mir6361-201ENSMUST00000185079 101 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Mir6952-201ENSMUST00000185092 61 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm18728-201ENSMUST00000186155 753 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm43392-201ENSMUST00000196560 434 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm42464-202ENSMUST00000198111 774 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm2602-201ENSMUST00000202112 571 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm18467-201ENSMUST00000208805 434 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC4.13□□□□□ -1.75
Hmgb3O54879 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC4.13□□□□□ -1.75
Hmgb3O54879 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 AC157572.4-201ENSMUST00000228203 549 ntBASIC4.13□□□□□ -1.75
Hmgb3O54879 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hmgb3O54879 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms