Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 AC154283.1-201ENSMUST00000228417 389 ntBASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Gm42510-201ENSMUST00000196470 2258 ntBASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Mir92b-201ENSMUST00000102300 83 ntBASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Gm24117-201ENSMUST00000103973 133 ntBASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Gm14831-201ENSMUST00000120253 409 ntBASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 AC112142.1-206ENSMUST00000228136 982 ntBASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Snora30-201ENSMUST00000083325 130 ntBASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc180J3QNE4 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm19368-201ENSMUST00000221258 4424 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm25537-201ENSMUST00000103851 109 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm12131-201ENSMUST00000117479 359 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm5699-201ENSMUST00000152491 723 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm25907-201ENSMUST00000158486 125 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm16125-201ENSMUST00000159003 339 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm10087-201ENSMUST00000167650 330 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Vmn1r82-202ENSMUST00000191002 918 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm9317-201ENSMUST00000197055 862 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 AL645522.1-201ENSMUST00000197692 104 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm43418-201ENSMUST00000201334 428 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm4714-201ENSMUST00000203395 279 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gm46327-201ENSMUST00000218240 365 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 AC125399.1-201ENSMUST00000224236 595 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 AC133910.1-201ENSMUST00000228128 624 ntBASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc180J3QNE4 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Gm25096-201ENSMUST00000104043 129 ntBASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Mup-ps18-201ENSMUST00000120145 531 ntBASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Gm43309-201ENSMUST00000200837 458 ntBASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Gm6051-201ENSMUST00000201529 352 ntBASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC9.46□□□□□ -0.89
Ccdc180J3QNE4 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ccdc180J3QNE4 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ccdc180J3QNE4 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc180J3QNE4 Gm37916-201ENSMUST00000192153 2435 ntBASIC9.46□□□□□ -0.9
Ccdc180J3QNE4 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc180J3QNE4 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm14985-201ENSMUST00000118693 786 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm8614-201ENSMUST00000182528 978 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm4412-201ENSMUST00000186660 433 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm5215-201ENSMUST00000054380 405 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms