Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm20940-201ENSMUST00000197308 360 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm43712-201ENSMUST00000198020 291 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm17999-201ENSMUST00000211568 542 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Scn1aA2APX8 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.34□□□□□ -1.55
Scn1aA2APX8 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Gm26146-201ENSMUST00000104478 185 ntBASIC5.34□□□□□ -1.55
Scn1aA2APX8 Gm11366-201ENSMUST00000119279 429 ntBASIC5.34□□□□□ -1.55
Scn1aA2APX8 Gm12813-201ENSMUST00000119615 902 ntBASIC5.34□□□□□ -1.55
Scn1aA2APX8 Gm11909-201ENSMUST00000121424 759 ntBASIC5.34□□□□□ -1.55
Scn1aA2APX8 Gm16345-201ENSMUST00000146065 158 ntBASIC5.34□□□□□ -1.55
Scn1aA2APX8 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.34□□□□□ -1.55
Scn1aA2APX8 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.34□□□□□ -1.55
Scn1aA2APX8 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1aA2APX8 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Scn1aA2APX8 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.34□□□□□ -1.56
Scn1aA2APX8 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Scn1aA2APX8 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Scn1aA2APX8 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Scn1aA2APX8 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm12285-201ENSMUST00000117347 233 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm15171-201ENSMUST00000122191 334 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm16112-201ENSMUST00000159075 382 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Mir6416-201ENSMUST00000183664 117 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm18255-201ENSMUST00000211316 765 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm5045-201ENSMUST00000027054 810 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm24166-201ENSMUST00000082724 135 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm26376-201ENSMUST00000104784 110 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm14046-201ENSMUST00000119389 509 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm13213-201ENSMUST00000119668 474 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm12287-201ENSMUST00000119770 707 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm16125-201ENSMUST00000159003 339 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm3531-201ENSMUST00000162698 489 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm27688-201ENSMUST00000183634 91 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm43136-201ENSMUST00000200403 636 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm5750-201ENSMUST00000218711 801 ntBASIC5.33□□□□□ -1.56
Scn1aA2APX8 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scn1aA2APX8 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.32□□□□□ -1.56
Scn1aA2APX8 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm25293-201ENSMUST00000122792 285 ntBASIC5.32□□□□□ -1.56
Scn1aA2APX8 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm22529-201ENSMUST00000158817 123 ntBASIC5.32□□□□□ -1.56
Scn1aA2APX8 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.32□□□□□ -1.56
Scn1aA2APX8 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm28957-201ENSMUST00000190174 373 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms