Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn9Q9Z0S7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn9Q9Z0S7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cldn9Q9Z0S7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn9Q9Z0S7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn9Q9Z0S7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn9Q9Z0S7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn9Q9Z0S7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn9Q9Z0S7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Gm11927-201ENSMUST00000118472 759 ntBASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn9Q9Z0S7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Gm2559-201ENSMUST00000201323 363 ntBASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn9Q9Z0S7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms