Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip2Q9Z0H8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip2Q9Z0H8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip2Q9Z0H8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip2Q9Z0H8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Mir7071-201ENSMUST00000184847 69 ntBASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Gm5417-201ENSMUST00000079706 384 ntBASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip2Q9Z0H8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Gm10517-202ENSMUST00000192970 758 ntBASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip2Q9Z0H8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 Gm10418-201ENSMUST00000100943 576 ntBASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip2Q9Z0H8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Gm15565-201ENSMUST00000118890 427 ntBASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Gm21814-202ENSMUST00000203277 873 ntBASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip2Q9Z0H8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Gm29791-202ENSMUST00000207888 369 ntBASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Timm23-208ENSMUST00000226683 750 ntBASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Clip2Q9Z0H8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip2Q9Z0H8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip2Q9Z0H8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms