Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Gm11539-201ENSMUST00000119837 557 ntBASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Gm13436-201ENSMUST00000120418 567 ntBASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf13bQ9WU72 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Gm13559-201ENSMUST00000120476 863 ntBASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.24■□□□□ 0.67
Tnfsf13bQ9WU72 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Gm6433-201ENSMUST00000118634 875 ntBASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Gm13836-201ENSMUST00000121159 501 ntBASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Gm9987-201ENSMUST00000069768 567 ntBASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf13bQ9WU72 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Gm24841-201ENSMUST00000158676 357 ntBASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf13bQ9WU72 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf13bQ9WU72 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf13bQ9WU72 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf13bQ9WU72 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms