Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfwd2Q9R1A8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rfwd2Q9R1A8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd2Q9R1A8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Gm5874-201ENSMUST00000096101 508 ntBASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd2Q9R1A8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd2Q9R1A8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfwd2Q9R1A8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfwd2Q9R1A8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Gm10033-202ENSMUST00000211874 928 ntBASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd2Q9R1A8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.25■□□□□ 0.51
Rfwd2Q9R1A8 Gm42642-201ENSMUST00000200683 355 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms