Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.31■□□□□ 0.36
Cdh17Q9R100 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Cdh17Q9R100 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.3■□□□□ 0.36
Cdh17Q9R100 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Gm42569-201ENSMUST00000200539 472 ntBASIC17.3■□□□□ 0.36
Cdh17Q9R100 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cdh17Q9R100 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Cdh17Q9R100 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.29■□□□□ 0.36
Cdh17Q9R100 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Gm26524-201ENSMUST00000192339 390 ntBASIC17.29■□□□□ 0.36
Cdh17Q9R100 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Gm44549-201ENSMUST00000208351 577 ntBASIC17.29■□□□□ 0.36
Cdh17Q9R100 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Zfp783-201ENSMUST00000095946 670 ntBASIC17.29■□□□□ 0.36
Cdh17Q9R100 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Cdh17Q9R100 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.28■□□□□ 0.36
Cdh17Q9R100 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Gm29791-202ENSMUST00000207888 369 ntBASIC17.28■□□□□ 0.36
Cdh17Q9R100 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.28■□□□□ 0.36
Cdh17Q9R100 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Cdh17Q9R100 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh17Q9R100 Gm13148-201ENSMUST00000118892 745 ntBASIC17.27■□□□□ 0.36
Cdh17Q9R100 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.27■□□□□ 0.36
Cdh17Q9R100 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms