Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Llcfc1Q9D9P8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Llcfc1Q9D9P8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Llcfc1Q9D9P8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Llcfc1Q9D9P8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Llcfc1Q9D9P8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Llcfc1Q9D9P8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Llcfc1Q9D9P8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Gm5874-201ENSMUST00000096101 508 ntBASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Llcfc1Q9D9P8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Gm38285-201ENSMUST00000192928 922 ntBASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Gm6365-201ENSMUST00000054711 744 ntBASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Llcfc1Q9D9P8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Llcfc1Q9D9P8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Gm7290-201ENSMUST00000104990 617 ntBASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Gm12918-201ENSMUST00000120234 636 ntBASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Gm15710-201ENSMUST00000121821 636 ntBASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Gm5075-201ENSMUST00000196916 622 ntBASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Llcfc1Q9D9P8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms