Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf3c6Q9D8P7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf3c6Q9D8P7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Gtf3c6Q9D8P7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf3c6Q9D8P7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Dio3-201ENSMUST00000097228 1449 ntBASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Mir2861-201ENSMUST00000175539 82 ntBASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Gm4968-201ENSMUST00000071458 858 ntBASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Gtf3c6Q9D8P7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.92■□□□□ 0.62
Gtf3c6Q9D8P7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c6Q9D8P7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c6Q9D8P7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gtf3c6Q9D8P7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c6Q9D8P7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf3c6Q9D8P7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf3c6Q9D8P7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf3c6Q9D8P7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms