Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1bQ9D0N7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1bQ9D0N7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chaf1bQ9D0N7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chaf1bQ9D0N7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chaf1bQ9D0N7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Gm43017-201ENSMUST00000198296 752 ntBASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Gm6139-201ENSMUST00000079261 882 ntBASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chaf1bQ9D0N7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Gm27454-201ENSMUST00000185090 204 ntBASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms