Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shmt2Q9CZN7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shmt2Q9CZN7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shmt2Q9CZN7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shmt2Q9CZN7 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shmt2Q9CZN7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.9■□□□□ 0.3
Shmt2Q9CZN7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms