Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh15Q99PJ1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Gm5864-201ENSMUST00000202263 970 ntBASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.26■□□□□ 0.83
Pcdh15Q99PJ1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Tgds-204ENSMUST00000228543 1594 ntBASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Gm6623-201ENSMUST00000173570 544 ntBASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh15Q99PJ1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Gm45328-201ENSMUST00000210942 917 ntBASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh15Q99PJ1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Gm18733-201ENSMUST00000173950 856 ntBASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh15Q99PJ1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh15Q99PJ1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh15Q99PJ1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Pcdh15Q99PJ1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh15Q99PJ1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms