Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Pcdhac2Q91Y09 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.32■□□□□ 0.68
Pcdhac2Q91Y09 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac2Q91Y09 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac2Q91Y09 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac2Q91Y09 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac2Q91Y09 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac2Q91Y09 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac2Q91Y09 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Ank2-226ENSMUST00000189368 339 ntBASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac2Q91Y09 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Gm24841-201ENSMUST00000158676 357 ntBASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Gm18101-201ENSMUST00000215769 548 ntBASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Gm7370-201ENSMUST00000219471 767 ntBASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac2Q91Y09 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac2Q91Y09 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Gm27741-201ENSMUST00000185060 237 ntBASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhac2Q91Y09 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac2Q91Y09 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms