Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Gm10418-201ENSMUST00000100943 576 ntBASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Gm29791-202ENSMUST00000207888 369 ntBASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb1Q91Y08 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Gm12441-201ENSMUST00000121806 588 ntBASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhb1Q91Y08 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Gm11249-201ENSMUST00000117071 859 ntBASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Gm10138-203ENSMUST00000206952 366 ntBASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb1Q91Y08 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Mir6349-201ENSMUST00000184059 97 ntBASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb1Q91Y08 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb1Q91Y08 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms