Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Mir5133-201ENSMUST00000174955 77 ntBASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga11Q91XY8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Gm6211-202ENSMUST00000167849 925 ntBASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Gm8969-201ENSMUST00000199694 526 ntBASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.11■□□□□ 0.33
Pcdhga11Q91XY8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga11Q91XY8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga11Q91XY8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga11Q91XY8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga11Q91XY8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhga11Q91XY8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms