Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhga9Q91XX9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga9Q91XX9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga9Q91XX9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga9Q91XX9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Gm13158-201ENSMUST00000122007 736 ntBASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga9Q91XX9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga9Q91XX9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms