Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trex1Q91XB0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Trex1Q91XB0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trex1Q91XB0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Gm23634-201ENSMUST00000175071 91 ntBASIC20.39■□□□□ 0.85
Trex1Q91XB0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trex1Q91XB0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Gm10013-201ENSMUST00000106074 672 ntBASIC20.38■□□□□ 0.85
Trex1Q91XB0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Gm21362-201ENSMUST00000194272 928 ntBASIC20.38■□□□□ 0.85
Trex1Q91XB0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trex1Q91XB0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trex1Q91XB0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Gm7638-201ENSMUST00000121348 967 ntBASIC20.37■□□□□ 0.85
Trex1Q91XB0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trex1Q91XB0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.36■□□□□ 0.85
Trex1Q91XB0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trex1Q91XB0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Gm7791-201ENSMUST00000219066 539 ntBASIC20.35■□□□□ 0.85
Trex1Q91XB0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trex1Q91XB0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Fst-202ENSMUST00000223640 2612 ntBASIC20.34■□□□□ 0.85
Trex1Q91XB0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms