Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Gm33142-201ENSMUST00000193913 867 ntBASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Gm18101-201ENSMUST00000215769 548 ntBASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc44a4Q91VA1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Gm29791-202ENSMUST00000207888 369 ntBASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Gm7370-201ENSMUST00000219471 767 ntBASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Fst-202ENSMUST00000223640 2612 ntBASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc44a4Q91VA1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc44a4Q91VA1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc44a4Q91VA1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slc44a4Q91VA1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Slc44a4Q91VA1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc44a4Q91VA1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc44a4Q91VA1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Gm10418-201ENSMUST00000100943 576 ntBASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Gm16061-201ENSMUST00000122167 857 ntBASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc44a4Q91VA1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc44a4Q91VA1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc44a4Q91VA1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc44a4Q91VA1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms