Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vsx1Q91V10 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Gm2274-201ENSMUST00000184539 609 ntBASIC17.54■□□□□ 0.4
Vsx1Q91V10 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vsx1Q91V10 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.54■□□□□ 0.4
Vsx1Q91V10 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.53■□□□□ 0.4
Vsx1Q91V10 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
Vsx1Q91V10 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.53■□□□□ 0.4
Vsx1Q91V10 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vsx1Q91V10 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Gm28033-201ENSMUST00000184224 96 ntBASIC17.52■□□□□ 0.4
Vsx1Q91V10 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Vsx1Q91V10 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vsx1Q91V10 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.52■□□□□ 0.39
Vsx1Q91V10 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vsx1Q91V10 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vsx1Q91V10 Gm25016-201ENSMUST00000158399 131 ntBASIC17.5■□□□□ 0.39
Vsx1Q91V10 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Vsx1Q91V10 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx1Q91V10 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx1Q91V10 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx1Q91V10 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx1Q91V10 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx1Q91V10 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx1Q91V10 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms