Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.35■■□□□ 1.01
StrcQ8VIM6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
StrcQ8VIM6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
StrcQ8VIM6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
StrcQ8VIM6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
StrcQ8VIM6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
StrcQ8VIM6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
StrcQ8VIM6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
StrcQ8VIM6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
StrcQ8VIM6 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.33■■□□□ 1.01
StrcQ8VIM6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
StrcQ8VIM6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.32■■□□□ 1
StrcQ8VIM6 Gm6623-201ENSMUST00000173570 544 ntBASIC21.32■■□□□ 1
StrcQ8VIM6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
StrcQ8VIM6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
StrcQ8VIM6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
StrcQ8VIM6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.32■■□□□ 1
StrcQ8VIM6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
StrcQ8VIM6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
StrcQ8VIM6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.32■■□□□ 1
StrcQ8VIM6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.32■■□□□ 1
StrcQ8VIM6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.32■■□□□ 1
StrcQ8VIM6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
StrcQ8VIM6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.31■■□□□ 1
StrcQ8VIM6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.31■■□□□ 1
StrcQ8VIM6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.31■■□□□ 1
StrcQ8VIM6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
StrcQ8VIM6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.3■■□□□ 1
StrcQ8VIM6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.3■■□□□ 1
StrcQ8VIM6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
StrcQ8VIM6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.3■■□□□ 1
StrcQ8VIM6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.3■■□□□ 1
StrcQ8VIM6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
StrcQ8VIM6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
StrcQ8VIM6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.3■■□□□ 1
StrcQ8VIM6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
StrcQ8VIM6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
StrcQ8VIM6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
StrcQ8VIM6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.29■■□□□ 1
StrcQ8VIM6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.29■■□□□ 1
StrcQ8VIM6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
StrcQ8VIM6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
StrcQ8VIM6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
StrcQ8VIM6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.29■■□□□ 1
StrcQ8VIM6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
StrcQ8VIM6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
StrcQ8VIM6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
StrcQ8VIM6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.28■■□□□ 1
StrcQ8VIM6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
StrcQ8VIM6 Gm27525-201ENSMUST00000184465 107 ntBASIC21.28■■□□□ 1
StrcQ8VIM6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
StrcQ8VIM6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms