Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Gm15039-201ENSMUST00000118914 875 ntBASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H1fooQ8VIK3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Gm2399-201ENSMUST00000104944 225 ntBASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Gm13148-201ENSMUST00000118892 745 ntBASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H1fooQ8VIK3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H1fooQ8VIK3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.84□□□□□ -0.03
H1fooQ8VIK3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H1fooQ8VIK3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
H1fooQ8VIK3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
H1fooQ8VIK3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.83□□□□□ -0.03
H1fooQ8VIK3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H1fooQ8VIK3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Gm26524-201ENSMUST00000192339 390 ntBASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Gm37179-201ENSMUST00000194862 823 ntBASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Gm44549-201ENSMUST00000208351 577 ntBASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms