Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg4Q8VHY0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg4Q8VHY0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg4Q8VHY0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg4Q8VHY0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Gm5186-201ENSMUST00000218781 920 ntBASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Gm7791-201ENSMUST00000219066 539 ntBASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cspg4Q8VHY0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.26■□□□□ 0.03
Cspg4Q8VHY0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cspg4Q8VHY0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Gm18195-201ENSMUST00000207604 706 ntBASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.24■□□□□ 0.03
Cspg4Q8VHY0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Gm4974-201ENSMUST00000209974 875 ntBASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cspg4Q8VHY0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms