Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Gm13559-201ENSMUST00000120476 863 ntBASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Gm10231-201ENSMUST00000181584 441 ntBASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Gm10175-202ENSMUST00000208752 441 ntBASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr1Q8VHP6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Gm10517-202ENSMUST00000192970 758 ntBASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr1Q8VHP6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr1Q8VHP6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr1Q8VHP6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Gm12085-201ENSMUST00000119263 940 ntBASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Gm7889-201ENSMUST00000185591 958 ntBASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr1Q8VHP6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdhr1Q8VHP6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdhr1Q8VHP6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdhr1Q8VHP6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.26■□□□□ 0.35
Cdhr1Q8VHP6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr1Q8VHP6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr1Q8VHP6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr1Q8VHP6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr1Q8VHP6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdhr1Q8VHP6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr1Q8VHP6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms