Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc71Q8VEG0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc71Q8VEG0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Ank2-226ENSMUST00000189368 339 ntBASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Gm21559-201ENSMUST00000220638 855 ntBASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Gm8587-201ENSMUST00000076538 843 ntBASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc71Q8VEG0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Gm9103-201ENSMUST00000119371 405 ntBASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc71Q8VEG0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Gm17661-201ENSMUST00000170317 270 ntBASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Gm27389-201ENSMUST00000183622 195 ntBASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Mir1668-201ENSMUST00000184114 107 ntBASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Gm9731-201ENSMUST00000209480 747 ntBASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc71Q8VEG0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc71Q8VEG0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Gm7284-201ENSMUST00000131667 944 ntBASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Gm37025-201ENSMUST00000195159 829 ntBASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Il3ra-202ENSMUST00000223589 738 ntBASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccdc71Q8VEG0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc71Q8VEG0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc71Q8VEG0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccdc71Q8VEG0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc71Q8VEG0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc71Q8VEG0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc71Q8VEG0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc71Q8VEG0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc71Q8VEG0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms