Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup35Q8R4R6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup35Q8R4R6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup35Q8R4R6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup35Q8R4R6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.52□□□□□ -0.08
Nup35Q8R4R6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Nup35Q8R4R6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup35Q8R4R6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nup35Q8R4R6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup35Q8R4R6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup35Q8R4R6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup35Q8R4R6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup35Q8R4R6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup35Q8R4R6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Gm13534-201ENSMUST00000121169 513 ntBASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Gm6139-201ENSMUST00000079261 882 ntBASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nup35Q8R4R6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup35Q8R4R6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup35Q8R4R6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms