Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxe1Q8R2I0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.38■□□□□ 0.53
Foxe1Q8R2I0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 AW822252-206ENSMUST00000208904 237 ntBASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.37■□□□□ 0.53
Foxe1Q8R2I0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Gm34391-201ENSMUST00000203706 907 ntBASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Foxe1Q8R2I0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Birc2-201ENSMUST00000054878 378 ntBASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Foxe1Q8R2I0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxe1Q8R2I0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxe1Q8R2I0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.33■□□□□ 0.53
Foxe1Q8R2I0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxe1Q8R2I0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxe1Q8R2I0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxe1Q8R2I0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Mir8098-201ENSMUST00000184011 137 ntBASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Gm5864-201ENSMUST00000202263 970 ntBASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxe1Q8R2I0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxe1Q8R2I0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxe1Q8R2I0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxe1Q8R2I0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxe1Q8R2I0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Foxe1Q8R2I0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxe1Q8R2I0 Gm24841-201ENSMUST00000158676 357 ntBASIC18.31■□□□□ 0.52
Foxe1Q8R2I0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.31■□□□□ 0.52
Foxe1Q8R2I0 Gm6623-201ENSMUST00000173570 544 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms