Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21■□□□□ 0.95
Cchcr1Q8K2I2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Gm26524-201ENSMUST00000192339 390 ntBASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Zfp783-201ENSMUST00000095946 670 ntBASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cchcr1Q8K2I2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Gm27405-201ENSMUST00000184201 112 ntBASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Flg-201ENSMUST00000050758 1488 ntBASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Cchcr1Q8K2I2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Mir5133-201ENSMUST00000174955 77 ntBASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cchcr1Q8K2I2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cchcr1Q8K2I2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Cchcr1Q8K2I2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Gm10418-201ENSMUST00000100943 576 ntBASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Gm13148-201ENSMUST00000118892 745 ntBASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Rab3c-203ENSMUST00000224180 967 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms