Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.06■□□□□ 0.64
Vcpip1Q8CDG3 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Vcpip1Q8CDG3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Gm6211-202ENSMUST00000167849 925 ntBASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vcpip1Q8CDG3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcpip1Q8CDG3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcpip1Q8CDG3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Vcpip1Q8CDG3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vcpip1Q8CDG3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vcpip1Q8CDG3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.02■□□□□ 0.63
Vcpip1Q8CDG3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms