Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc46a2Q8CA03 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Slc46a2Q8CA03 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc46a2Q8CA03 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc46a2Q8CA03 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc46a2Q8CA03 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Slc46a2Q8CA03 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.08■□□□□ 0.33
Slc46a2Q8CA03 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc46a2Q8CA03 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Gm8495-201ENSMUST00000188740 694 ntBASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Gm43017-201ENSMUST00000198296 752 ntBASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slc46a2Q8CA03 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Gm43060-201ENSMUST00000200621 289 ntBASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc46a2Q8CA03 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Gm18284-201ENSMUST00000172604 624 ntBASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Haglr-201ENSMUST00000100000 2085 ntBASIC17.05■□□□□ 0.32
Slc46a2Q8CA03 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms