Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Alx1Q8C8B0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alx1Q8C8B0 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.79■□□□□ 0.92
Alx1Q8C8B0 Gm10252-201ENSMUST00000209541 832 ntBASIC20.79■□□□□ 0.92
Alx1Q8C8B0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Alx1Q8C8B0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alx1Q8C8B0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.78■□□□□ 0.92
Alx1Q8C8B0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Mir5122-201ENSMUST00000175004 89 ntBASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Alx1Q8C8B0 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Gm21814-202ENSMUST00000203277 873 ntBASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.76■□□□□ 0.91
Alx1Q8C8B0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Alx1Q8C8B0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alx1Q8C8B0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Odf3b-204ENSMUST00000227834 930 ntBASIC20.73■□□□□ 0.91
Alx1Q8C8B0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx1Q8C8B0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.72■□□□□ 0.91
Alx1Q8C8B0 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms