Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam78aQ8C552 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fam78aQ8C552 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Fam78aQ8C552 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.88■□□□□ 0.61
Fam78aQ8C552 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Fam78aQ8C552 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Gm7638-201ENSMUST00000121348 967 ntBASIC18.87■□□□□ 0.61
Fam78aQ8C552 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Fam78aQ8C552 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Gm10418-201ENSMUST00000100943 576 ntBASIC18.86■□□□□ 0.61
Fam78aQ8C552 AA414768-201ENSMUST00000121924 1257 ntBASIC18.86■□□□□ 0.61
Fam78aQ8C552 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Gm6345-202ENSMUST00000180900 204 ntBASIC18.86■□□□□ 0.61
Fam78aQ8C552 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.86■□□□□ 0.61
Fam78aQ8C552 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Fam78aQ8C552 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.86■□□□□ 0.61
Fam78aQ8C552 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam78aQ8C552 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.85■□□□□ 0.61
Fam78aQ8C552 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Gm7791-201ENSMUST00000219066 539 ntBASIC18.85■□□□□ 0.61
Fam78aQ8C552 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Golph3-205ENSMUST00000228671 2842 ntBASIC18.85■□□□□ 0.61
Fam78aQ8C552 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fam78aQ8C552 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Gm22697-201ENSMUST00000175194 63 ntBASIC18.84■□□□□ 0.61
Fam78aQ8C552 Gm29791-202ENSMUST00000207888 369 ntBASIC18.84■□□□□ 0.61
Fam78aQ8C552 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.84■□□□□ 0.61
Fam78aQ8C552 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.83■□□□□ 0.61
Fam78aQ8C552 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam78aQ8C552 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam78aQ8C552 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam78aQ8C552 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Fam78aQ8C552 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Fam78aQ8C552 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam78aQ8C552 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.83■□□□□ 0.6
Fam78aQ8C552 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.83■□□□□ 0.6
Fam78aQ8C552 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.83■□□□□ 0.6
Fam78aQ8C552 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam78aQ8C552 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms