Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc60Q8C4J0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC22.64■■□□□ 1.22
Ccdc60Q8C4J0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ccdc60Q8C4J0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ccdc60Q8C4J0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Ccdc60Q8C4J0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ccdc60Q8C4J0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Gm22240-201ENSMUST00000175225 82 ntBASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Gm43182-201ENSMUST00000199476 2528 ntBASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc60Q8C4J0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Gm29791-202ENSMUST00000207888 369 ntBASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc60Q8C4J0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Gm15378-201ENSMUST00000121894 207 ntBASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc60Q8C4J0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Gm37292-201ENSMUST00000192062 758 ntBASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc60Q8C4J0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Gm13401-201ENSMUST00000117074 291 ntBASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc60Q8C4J0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Gm43183-201ENSMUST00000200632 547 ntBASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc60Q8C4J0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms