Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Gm6576-201ENSMUST00000169678 883 ntBASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Gm43183-201ENSMUST00000200632 547 ntBASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp44Q8C2S0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp44Q8C2S0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Usp44Q8C2S0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Usp44Q8C2S0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Gm15378-201ENSMUST00000121894 207 ntBASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.82■□□□□ 0.92
Usp44Q8C2S0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp44Q8C2S0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Gm8520-201ENSMUST00000186517 868 ntBASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.8■□□□□ 0.92
Usp44Q8C2S0 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.79■□□□□ 0.92
Usp44Q8C2S0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Usp44Q8C2S0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp44Q8C2S0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp44Q8C2S0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp44Q8C2S0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp44Q8C2S0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp44Q8C2S0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp44Q8C2S0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp44Q8C2S0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp44Q8C2S0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp44Q8C2S0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.77■□□□□ 0.92
Usp44Q8C2S0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp44Q8C2S0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp44Q8C2S0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.77■□□□□ 0.92
Usp44Q8C2S0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp44Q8C2S0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp44Q8C2S0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp44Q8C2S0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.77■□□□□ 0.91
Usp44Q8C2S0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp44Q8C2S0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp44Q8C2S0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp44Q8C2S0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp44Q8C2S0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp44Q8C2S0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms