Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Dio3-201ENSMUST00000097228 1449 ntBASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Gm12441-201ENSMUST00000121806 588 ntBASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Gm27275-201ENSMUST00000184318 272 ntBASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sh3rf3Q8C120 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf3Q8C120 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Gm20049-201ENSMUST00000219950 730 ntBASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf3Q8C120 Idnk-204ENSMUST00000226010 1898 ntBASIC18.46■□□□□ 0.54
Sh3rf3Q8C120 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Gm11249-201ENSMUST00000117071 859 ntBASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Gm12527-201ENSMUST00000117967 564 ntBASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Sh3rf3Q8C120 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf3Q8C120 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms