Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.02■□□□□ 0.47
Sh3rf2Q8BZT2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Sh3rf2Q8BZT2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Gm7889-201ENSMUST00000185591 958 ntBASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf2Q8BZT2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Gm4974-201ENSMUST00000209974 875 ntBASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf2Q8BZT2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf2Q8BZT2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf2Q8BZT2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sh3rf2Q8BZT2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf2Q8BZT2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sh3rf2Q8BZT2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sh3rf2Q8BZT2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms