Protein–RNA interactions for Protein: Q8BVP1

Triml1, Probable E3 ubiquitin-protein ligase TRIML1, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Triml1Q8BVP1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Triml1Q8BVP1 Grk6-206ENSMUST00000224995 2971 ntBASIC20.5■□□□□ 0.87
Triml1Q8BVP1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Triml1Q8BVP1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Triml1Q8BVP1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Triml1Q8BVP1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Triml1Q8BVP1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Triml1Q8BVP1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Triml1Q8BVP1 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Triml1Q8BVP1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Triml1Q8BVP1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Triml1Q8BVP1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Triml1Q8BVP1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Gm43183-201ENSMUST00000200632 547 ntBASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Triml1Q8BVP1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Triml1Q8BVP1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms