Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Gm7638-201ENSMUST00000121348 967 ntBASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Gm18958-201ENSMUST00000174258 762 ntBASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Gm27357-201ENSMUST00000183754 135 ntBASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx17Q8BVL3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Snx17Q8BVL3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.69■□□□□ 0.74
Snx17Q8BVL3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx17Q8BVL3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.69■□□□□ 0.74
Snx17Q8BVL3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx17Q8BVL3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snx17Q8BVL3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snx17Q8BVL3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms