Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Dancr-204ENSMUST00000132389 2347 ntBASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Gm45102-201ENSMUST00000207427 857 ntBASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl3Q8BLF2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Serp2-204ENSMUST00000228055 705 ntBASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdkl3Q8BLF2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdkl3Q8BLF2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdkl3Q8BLF2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdkl3Q8BLF2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdkl3Q8BLF2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdkl3Q8BLF2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkl3Q8BLF2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Gm14117-201ENSMUST00000122417 843 ntBASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkl3Q8BLF2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms