Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.52■□□□□ 0.07
Cdhr3Q8BL00 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdhr3Q8BL00 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdhr3Q8BL00 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdhr3Q8BL00 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdhr3Q8BL00 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr3Q8BL00 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Gm7514-201ENSMUST00000209475 934 ntBASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cdhr3Q8BL00 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr3Q8BL00 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr3Q8BL00 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms