Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Gm8969-201ENSMUST00000199694 526 ntBASIC17.12■□□□□ 0.33
Rnf38Q8BI21 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf38Q8BI21 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf38Q8BI21 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf38Q8BI21 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf38Q8BI21 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf38Q8BI21 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Gm27405-201ENSMUST00000184201 112 ntBASIC17.07■□□□□ 0.32
Rnf38Q8BI21 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms