Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Gm6576-201ENSMUST00000169678 883 ntBASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim23Q8BGX0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Fst-202ENSMUST00000223640 2612 ntBASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.09■□□□□ 0.33
Trim23Q8BGX0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim23Q8BGX0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim23Q8BGX0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim23Q8BGX0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.08■□□□□ 0.33
Trim23Q8BGX0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim23Q8BGX0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim23Q8BGX0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Gm12382-201ENSMUST00000122005 922 ntBASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim23Q8BGX0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Gm715-201ENSMUST00000117865 831 ntBASIC17.07■□□□□ 0.32
Trim23Q8BGX0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Gm29791-202ENSMUST00000207888 369 ntBASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Gm10252-201ENSMUST00000209541 832 ntBASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms