Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Samm50Q8BGH2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Samm50Q8BGH2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Samm50Q8BGH2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Samm50Q8BGH2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Samm50Q8BGH2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Samm50Q8BGH2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Samm50Q8BGH2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.81■□□□□ 0.92
Samm50Q8BGH2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Rab3c-203ENSMUST00000224180 967 ntBASIC20.8■□□□□ 0.92
Samm50Q8BGH2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.8■□□□□ 0.92
Samm50Q8BGH2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Gm27011-201ENSMUST00000182352 972 ntBASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Gm26524-201ENSMUST00000192339 390 ntBASIC20.79■□□□□ 0.92
Samm50Q8BGH2 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Samm50Q8BGH2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Tgds-204ENSMUST00000228543 1594 ntBASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Samm50Q8BGH2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Samm50Q8BGH2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.77■□□□□ 0.91
Samm50Q8BGH2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Samm50Q8BGH2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Samm50Q8BGH2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 213.4 ms